AlexsLemonade / AlexsLemonade/scpca-docs

Update Seurat conversion with scpcaTools function

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Dominant language
Python
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2d 21h
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Description

Currently we describe conversion to Seurat by giving several individual wrangling steps: https://scpca.readthedocs.io/en/latest/faq.html#what-if-i-want-to-use-seurat-instead-of-bioconductor

It may help to additionally tell users about `scpcaTools::sce_to_seurat()`, including instructions on installing this package and any associated package caveats.

Contributor guide

No contributing guide indexed for this repository

Research direction

Open the FAQ section linked in the issue and review the existing Seurat conversion guidance. Document scpcaTools::sce_to_seurat(), including how to install scpcaTools and any package caveats; done means users can follow the updated instructions to convert to Seurat.

Written by the indexing model from the issue text.

Assessment

Domain
documentation
Issue type
Documentation
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
48/100

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