AlexsLemonade / AlexsLemonade/OpenScPCA-analysis
Create preliminary plots evaluating metaprograms from Neuroblastoma pilot
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Description
### If you are filing this issue based on a specific GitHub Discussion, please link to the relevant Discussion.
_No response_
### Describe the goals of the changes to the analysis module.
We generated metaprograms on all Neuroblastoma samples in SCPCP000004 with `ews-nf`, which follows the same pipeline being implemented in `metafactory`. We want to create some initial figures that we can use to summarize these metaprograms.
### What will your pull request contain?
A script that reads in the metaprograms and outputs figures that might be helpful to show for this pilot group when presenting the `metafactory` workflow. The exact figures I want to make are TBD, but might include a heatmap of the top gene sets across each metaprogram, the correlation heatmap, and/or a UMAP of all neuroendocrine cells where cells are colored by metaprogram scores.
### Will you require additional software beyond what is already in the analysis module?
_No response_
### Will you require different computational resources beyond what the analysis module already uses?
_No response_
### If known, when do you expect to file the pull request?
_No response_
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